Paper name

Neutrophil-derived itaconate facilitates tiered pulmonary inflammation via Kdm5b-associated epigenetic remodeling in alveolar macrophages.

Author

Lim G*, Kim J*, Park D, Lee J, Roh YJ, Yang M, Lee S, Yang S, Baek S, Park J, Lim HC, Lee J, Kim S, Seo H, Kim Y, Jung SM, Yang H, Sun P, Lee SE, Kang YE, Park Y, Son YM, Yi H, Hong JY, Luis FM, Kang DH, Kim C#, Yoon S#, and Choi DW#

Journal+date

Cell Reports. 2026 Jun.

Link

https://www.cell.com/cell-reports/fulltext/S2211-1247(26)00490-0

Acute lung injury (ALI) and its severe form, acute respiratory distress syndrome (ARDS), present a s...

Paper name

Methionine metabolism is linked with phospholipid and glutamine metabolism to drive ferroptosis

Author

Kim JW*, Jang SY*, Roh YJ*, Ju Y, Kang JB, Park BS, Lee JY, Kim MW, Jeong BJ, Jung W, Oh KJ, Kim WK, Han BS, Bae KH, Kim T, Kang YP, Yoo HM, Kim C, Dixon SJ, Choi DW#, Hwang GS#, Lee EW#

Journal, date

Cell Reports. 2026 Mar

Link

https://www.cell.com/cell-reports/fulltext/S2211-1247(26)00235-4

Ferroptosis is a lipid peroxidation-induced cell death mechanism that is regulated by amino acid met...

Paper name

Microbiota-derived metabolite, 3-phenyllactic acid, prolongs healthspan by enhancing mitochondrial function and stress resilience via SKN-1/ATFS-1.

Author

Kim J*, Jo Y*, Lim G, Ji Y, Roh J, Kim W, Yi H#, Choi DW#, Cho D#, and Ryu D#.

Journal, date

Nature Communications. 2024 Dec.

Link

https://www.nature.com/articles/s41467-024-55015-1

The mechanisms underlying the impact of probiotic supplementation on health remain largely elusive....

Journal name

Binge drinking triggers VGLUT3-mediated glutamate secretion and subsequent hepatic inflammation by activating mGluR5/NOX2 in Kupffer cells.

Author

Yang K, Kim K, Ryu T, Shim YR, Kim HH, Choi SE, Kim MJ, Chung KPS, Lee E, Lee KW, Jeon J, Kim P, Kim YS, Ku T, Jeong H, Nam KT, Lim G, Choi DW, Kim SH, Eun HS, Kim W, Jeong WI.

Journal+Date

Nature Communications. 2025 Jul.

Link

https://www.nature.com/articles/s41467-025-60820-3

Journal name

Metabolic Sparks in the Liver: Metabolic and Epigenetic Reprogramming in Hepatic Stellate Cells Activation and Its Implications for Human Metabolic Diseases.

Author

Roh YJ*, Kim H*, Choi DW.

Journal+Date

Diabetes Metabolism Joural. 2025 May

Link

https://e-dmj.org/journal/view.php?doi=10.4093/dmj.2025.0195

Journal name

Unraveling the role of the mitochondrial one-carbon pathway in undifferentiated thyroid cancer by multi-omics analyses.

Journal name

Lee SE, Park S, Yi S, Choi NR, Lim MA, Chang JW, Won H, Kim JR, Ko HM, Chung E, Park YJ, Cho SW, Yu HW, Choi JY, Yeo M, Yi B, Yi K, Lim J, Koh J, Lee MJ, Heo JY, Yoon SJ, Kwon SW, Park J, Chu IS, Kim JM, Kim S, Shan Y, Liu L, Hong S, Choi DW, Park J, Ju YS, Shong M, Kim S, Koo BS and Kang YE.

Journal+Date

Nature Communications. 2024 Feb.

Link

https://www.nature.com/articles/s41467-024-45366-0

Journal name

Mitochondrial morphology controls fatty acid utilization by changing CPT1 sensitivity to malonyl-CoA.

Author

Ngo J*, Choi DW*, Chen J, Shimir A, Stanley IA, Lako A, Ficarro S, Chapuy B, Rodig S, Shipp MA, Marto JA, Danial NN and Shirihai O.

Journal+Date

EMBO Journal. 2023 Mar.

Link

https://link.springer.com/article/10.15252/embj.2022111901

Journal name

The role of immunomodulatory metabolites in shaping the inflammatory response of macrophages.

Author

Park D*, Lim G*, Yoon SJ, Yi HS, and Choi DW.

Journal+Date

BMB Reports. 2022 Nov

Link

https://www.bmbreports.org/journal/view.html?volume=55&number=11&spage=519

Journal name

MsrB1-regulated GAPDH oxidation plays programmatic roles in shaping metabolic and inflammatory signatures during macrophage activation.

Author

Yoo HJ*, Choi DW#, Roh YJ, Kim S, Lee HM, Lim G, Park D, Shin D, Lee HJ, Lee BC, Kim J#.

Journal+Date

Cell Reports. 2022 Nov

Link

https://www.sciencedirect.com/science/article/pii/S2211124722014632

Journal name

MCL-1 is a Master Regulator of Cancer Dependency on Fatty Acid Oxidation.

Author

Prew M, Adhikary U, Choi DW, Paulo J, Budhraja A, Opferman J, Gygi S, Danial NN, and Walensky L.

Journal+Date

Cell Reports. 2022 Oct.

Link

https://www.sciencedirect.com/science/article/pii/S2211124722012864?via%3Dihub

Journal name

Glucose dependent partitioning of arginine to the urea cycle protects b-cell from inflammation.

Author

Fu A, Alvarez-Perez JC, Avizonis D, Kin T, Ficarro S, Choi DW, Karakose E, Badur M, Evans L, Rosselot C, Bridon G , Bird G, Seo H, Dhe-Paganon S, Kamphorst J, Stewart A, Shapiro J, Marto JA, Walensky L, Jones R, Garcia-Ocana A, Danial NN.

Journal+Date

Nature Metabolism. 2020 May

Link

https://www.nature.com/articles/s42255-020-0199-4

Journal name

HCF-1 regulates de novo lipogenesis through a nutrient sensitive complex with ChREBP.

Author

Lane EA*, Choi DW*, Garcia-Haro L, Levine ZG, Tedoldi M, Walker S and Danial NN.

Journal+Date

Molecular Cell. 2019 Jul

Link

https://www.sciencedirect.com/science/article/pii/S1097276519303910?via%3Dihub

Journal name

The deubuiquitinating enzyme USP20 stabilize ULK1 and promotes autophagy initiation.

Author

Kim JH*, Seo D*, Kim SJ*, Choi DW*, Park JS, Ha J, Jung SM, Seo KW, Lee EW, Lee YS, Cheong H, Choi CY and Park SH.

Journal+Date

EMBO reports. 2018 Apr

Link

https://link.springer.com/article/10.15252/embr.201744378

Journal name

Differential contribution of the mitochondrial translation pathway to the survival of diffuse large B-cell lymphoma subsets.

Author

Norberg E, Lako A, Chen P, Stanley IA, Zhou F, Ficarro S, Chapuy B, Chen L, Rodig S, Shin D, Choi DW, Lee S, Shipp MA, Marto JA and Danial NN.

Journal+Date

Cell Death and Differentiation. 2017 Feb

Link

https://www.nature.com/articles/cdd2016116

Journal name

HIPK2 tumor suppressor regulates tumor cell growth via the phosphorylation of Notch1.

Author

Ann E, Kim M, Yoon J, Ahn J, Jo E, Lee H, Lee H, Kang H, Choi DW, Chun K, Lee JS, Choi CY, Ferrando A, and Park H.

Journal+Date

Cancer Research. 2016 Aug.

Link

https://aacrjournals.org/cancerres/article/76/16/4728/544281/Tumor-Suppressor-HIPK2-Regulates-Malignant-Growth?guestAccessKey=